BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB006E02SP1|AL425541
(431 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig848 820 0.0
>3x_Contig848
Length = 3091
Score = 820 bits (411), Expect = 0.0
Identities = 424/429 (98%), Gaps = 1/429 (0%)
Strand = Plus / Minus
Query: 1 acatgggcatcgatattgcgacaatagagacgtccatacaggaggaaaaaatatcaccgg 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2978 acatgggcatcgataatgcgacaatagagacgtccatacaggaggaaaaaatatcaccgg 2919
Query: 61 acgccaggccagttcttgtttggacctgatacactagtatttgtgaataatgttaagtat 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2918 -cgccaggccagttcttgtttggacctgatacactagtatttgtgaataatgttaagtat 2860
Query: 121 gttgtaccaaccttgtattcacgaagatccgagaggraatatttgatttggcgatgttta 180
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 2859 gttgtaccaaccttgtattcacgaagatccgagaggaaatatttgatttggcgatgttta 2800
Query: 181 atgagtgatgagatcaattcaacgatccagaatagagccactgaacaaataacaggatgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2799 atgagtgatgagatcaattcaacgatccagaatagagccactgaacaaataacaggatgc 2740
Query: 241 aagartttcttatacttaggatttggcaataatggtgcatcggtgacgatgaagaacatg 300
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2739 aagaatttcttatacttaggatttggcaataatggtgcatcggtgacgatgaagaacatg 2680
Query: 301 caaatggcggtaaatagttggraaggcatgatgtaccatgaaaaatagtatgtgaatata 360
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 2679 caaatggcggtaaatagttggaaaggcatgatgtaccatgaaaaatagtatgtgaatata 2620
Query: 361 gttgcgaaaaaccccaatccgtatagaacatgatgcaagtgatcgtgccacatgtttacg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2619 gttgcgaaaaaccccaatccgtatagaacatgatgcaagtgatcgtgccacatgtttacg 2560
Query: 421 gtgaaaaga 429
|||||||||
Sbjct: 2559 gtgaaaaga 2551
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2628
Number of Sequences: 1807
Number of extensions: 2628
Number of successful extensions: 56
Number of sequences better than 1.0e-20: 1
length of query: 431
length of database: 10,358,551
effective HSP length: 15
effective length of query: 416
effective length of database: 10,331,446
effective search space: 4297881536
effective search space used: 4297881536
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)